Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VEIS_RS22750 | Not Available | Positive | 5187653 - 5189029 | 49668.5 |
| branched-chain amino acid abc transporter permease | VEIS_RS22755 | Not Available | Positive | 5189134 - 5190009 | 31019.8 |
| branched-chain amino acid abc transporter atp-binding protein/permease | VEIS_RS22760 | Not Available | Positive | 5190030 - 5192552 | 91051.6 |
| sdr family oxidoreductase | VEIS_RS22765 | Not Available | Positive | 5192577 - 5193353 | 26833.4 |
| 3-hydroxyacyl-coa dehydrogenase | VEIS_RS22770 | P14755 | Positive | 5193358 - 5194299 | 34143.9 |
| 3-keto-5-aminohexanoate cleavage protein | VEIS_RS22775 | Not Available | Positive | 5194334 - 5195266 | 33739.6 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30900 | Not Available | Positive | 5195310 - 5195405 | 3645.54 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS22780 | Not Available | Positive | 5195426 - 5195860 | 16512.0 |
| dna-binding transcriptional regulator | VEIS_RS22785 | Not Available | Negative | 5195978 - 5196301 | 12054.7 |
| type ii toxin-antitoxin system rele/pare family toxin | VEIS_RS22790 | Not Available | Negative | 5196298 - 5196669 | 13548.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
