Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS30010 | Not Available | Negative | 5160042 - 5160182 | 4839.86 |
| hypothetical protein | VEIS_RS30015 | Not Available | Positive | 5160164 - 5160340 | 6435.95 |
| substrate-binding domain-containing protein | VEIS_RS22615 | O87590 | Negative | 5160360 - 5161382 | 37439.2 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22620 | Not Available | Positive | 5161510 - 5162544 | 35609.9 |
| amp-binding protein | VEIS_RS22625 | Not Available | Positive | 5162541 - 5164136 | 57393.1 |
| sdr family nad(p)-dependent oxidoreductase | VEIS_RS22630 | A7IQH5 | Positive | 5164160 - 5165131 | 34330.0 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22635 | Not Available | Positive | 5165149 - 5166132 | 34297.9 |
| citryl-coa lyase | VEIS_RS22640 | Not Available | Positive | 5166151 - 5166924 | 27350.9 |
| cyclase family protein | VEIS_RS22645 | Not Available | Positive | 5166921 - 5167955 | 37145.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | VEIS_RS22650 | Not Available | Positive | 5168234 - 5168479 | 8967.64 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
