Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS29315 | Not Available | Negative | 5142826 - 5142978 | 5599.93 |
| voc family protein | VEIS_RS22525 | Not Available | Positive | 5143032 - 5143574 | 20226.0 |
| s9 family peptidase | VEIS_RS22530 | Not Available | Positive | 5143588 - 5144769 | 43612.0 |
| 3-isopropylmalate dehydratase large subunit | VEIS_RS22535 | Q0A9B0 | Positive | 5144831 - 5146237 | 50380.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | VEIS_RS22540 | Not Available | Positive | 5146354 - 5147523 | 42181.4 |
| ketopantoate reductase family protein | VEIS_RS22545 | P65666 | Positive | 5147537 - 5148457 | 32072.7 |
| 3-isopropylmalate dehydratase small subunit | VEIS_RS22550 | Q0A9A9 | Positive | 5148465 - 5149106 | 24066.8 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22555 | Not Available | Positive | 5149170 - 5150135 | 33222.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS22560 | Not Available | Positive | 5150069 - 5150311 | 9308.85 |
| cbass cgamp synthase | VEIS_RS22570 | Not Available | Negative | 5150829 - 5152235 | 53620.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
