Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS22475 | Not Available | Positive | 5134079 - 5134720 | 24592.4 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS22480 | Not Available | Positive | 5134744 - 5134926 | 7088.22 |
| lysr family transcriptional regulator | VEIS_RS22485 | P52679 | Negative | 5134979 - 5135926 | 35659.2 |
| porin | VEIS_RS22490 | Not Available | Positive | 5136480 - 5137643 | 40601.6 |
| nadph-dependent fmn reductase | VEIS_RS22495 | Q9I4D4 | Positive | 5137667 - 5138305 | 22458.1 |
| abc transporter substrate-binding protein | VEIS_RS22500 | Not Available | Positive | 5138340 - 5139494 | 40272.3 |
| branched-chain amino acid abc transporter permease | VEIS_RS22505 | Not Available | Positive | 5139513 - 5140397 | 30928.9 |
| branched-chain amino acid abc transporter permease | VEIS_RS22510 | Not Available | Positive | 5140394 - 5141326 | 32675.2 |
| abc transporter atp-binding protein | VEIS_RS22515 | Not Available | Positive | 5141323 - 5142105 | 27737.9 |
| abc transporter atp-binding protein | VEIS_RS22520 | Not Available | Positive | 5142105 - 5142818 | 25661.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
