Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent monooxygenase | VEIS_RS22430 | Q3S8Q4 | Negative | 5124251 - 5125924 | 60385.9 |
| luxr c-terminal-related transcriptional regulator | VEIS_RS22435 | Not Available | Positive | 5126019 - 5126840 | 30394.8 |
| helix-turn-helix domain-containing protein | VEIS_RS22440 | Not Available | Negative | 5126827 - 5127285 | 17549.2 |
| lysr family transcriptional regulator | VEIS_RS22445 | P52661 | Negative | 5127379 - 5128335 | 34371.5 |
| coa transferase | VEIS_RS22450 | Not Available | Positive | 5128426 - 5129643 | 42913.4 |
| duf1254 domain-containing protein | VEIS_RS22455 | Not Available | Positive | 5129664 - 5130929 | 46808.7 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22460 | Not Available | Positive | 5130969 - 5131940 | 33734.5 |
| hypothetical protein | VEIS_RS25010 | Not Available | Negative | 5132117 - 5132473 | 12928.5 |
| hypothetical protein | VEIS_RS27200 | Not Available | Negative | 5132700 - 5132900 | 7191.41 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22470 | Not Available | Positive | 5132947 - 5133903 | 33204.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
