Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | VEIS_RS22380 | P96825 | Negative | 5116526 - 5117431 | 31898.1 |
| thiolase | VEIS_RS22385 | Not Available | Negative | 5117436 - 5118608 | 40340.3 |
| zn-ribbon domain-containing ob-fold protein | VEIS_RS27190 | Not Available | Negative | 5118605 - 5118982 | 13961.7 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22395 | Not Available | Negative | 5118975 - 5119931 | 33978.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS29300 | Not Available | Positive | 5120256 - 5120579 | 10988.8 |
| hypothetical protein | VEIS_RS29310 | Not Available | Negative | 5120964 - 5121356 | 14244.1 |
| fumarylacetoacetate hydrolase family protein | VEIS_RS22410 | Not Available | Negative | 5121448 - 5122464 | 36949.1 |
| voc family protein | VEIS_RS22415 | Not Available | Negative | 5122461 - 5123018 | 20568.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS22420 | Not Available | Negative | 5123026 - 5124003 | 34967.2 |
| hypothetical protein | VEIS_RS22425 | Not Available | Negative | 5124039 - 5124254 | 7852.24 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
