Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m55 family metallopeptidase | VEIS_RS22235 | Not Available | Positive | 5089588 - 5090409 | 29227.1 |
| hypothetical protein | VEIS_RS22240 | Not Available | Negative | 5090574 - 5090723 | 5283.08 |
| lyase family protein | VEIS_RS22245 | Q8YB50 | Negative | 5090749 - 5092140 | 49036.9 |
| tripartite tricarboxylate transporter substrate binding protein bugd | VEIS_RS22250 | Not Available | Negative | 5092154 - 5093143 | 34493.9 |
| adenylosuccinate lyase family protein | VEIS_RS22255 | O42889 | Negative | 5093181 - 5094557 | 49501.0 |
| gntr family transcriptional regulator | VEIS_RS22260 | Q82IW0 | Positive | 5094651 - 5095382 | 26630.0 |
| lysr family transcriptional regulator | VEIS_RS22265 | Not Available | Negative | 5095419 - 5095793 | 13675.7 |
| is110 family transposase | VEIS_RS22270 | Not Available | Positive | 5096002 - 5096967 | 34887.0 |
| 2fe-2s iron-sulfur cluster-binding protein | VEIS_RS22275 | Not Available | Negative | 5096984 - 5097304 | 11146.3 |
| nad(p)/fad-dependent oxidoreductase | VEIS_RS22280 | P16640 | Negative | 5097335 - 5098585 | 44623.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
