Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase-binding protein dksa | VEIS_RS22055 | P0CAU3 | Positive | 5044492 - 5045265 | 27742.0 |
| stas domain-containing protein | VEIS_RS22060 | Not Available | Positive | 5045302 - 5047203 | 69044.2 |
| atp-dependent protease subunit hslv | VEIS_RS22065 | A1WRK0 | Positive | 5047399 - 5047962 | 20051.2 |
| atp-dependent protease atpase subunit hslu | VEIS_RS22070 | A1WRK1 | Positive | 5048083 - 5049408 | 49360.3 |
| division/cell wall cluster transcriptional repressor mraz | VEIS_RS22075 | A1WRK2 | Positive | 5049663 - 5050091 | 15991.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | VEIS_RS22080 | A1WRK3 | Positive | 5050100 - 5051104 | 36204.6 |
| cell division protein ftsl | VEIS_RS22085 | Not Available | Positive | 5051101 - 5051418 | 11715.3 |
| penicillin-binding protein 2 | VEIS_RS22090 | P0A0U8 | Positive | 5051415 - 5053157 | 62874.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | VEIS_RS22095 | A1WC11 | Positive | 5053157 - 5054710 | 54118.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | VEIS_RS22100 | P11880 | Positive | 5054761 - 5056134 | 46607.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
