Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | VEIS_RS22005 | O34706 | Positive | 5031390 - 5032283 | 32190.1 |
| carbohydrate abc transporter permease | VEIS_RS22010 | O34518 | Positive | 5032280 - 5033122 | 30136.5 |
| hypothetical protein | VEIS_RS29275 | Not Available | Positive | 5033119 - 5035977 | 102593.0 |
| mbl fold metallo-hydrolase | VEIS_RS22020 | Not Available | Negative | 5036169 - 5037137 | 36290.0 |
| Trna-arg | Not Available | Not Available | Positive | 5037284 - 5037358 | Not Available |
| dna mismatch repair protein muts | VEIS_RS22030 | A1WRJ3 | Positive | 5037464 - 5040079 | 94979.2 |
| diaminopimelate epimerase | VEIS_RS29280 | A1TKA9 | Positive | 5040144 - 5041190 | 36936.3 |
| duf484 family protein | VEIS_RS22040 | Not Available | Positive | 5041187 - 5041918 | 26005.3 |
| tyrosine recombinase xerc | VEIS_RS22045 | Q8Y3C8 | Positive | 5041961 - 5043097 | 40542.0 |
| gtp-binding protein | VEIS_RS22050 | P24203 | Positive | 5043106 - 5044176 | 39641.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
