Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | VEIS_RS21855 | Q74RF8 | Positive | 4998835 - 4999662 | 30360.1 |
| gmc family oxidoreductase | VEIS_RS21860 | Q9WWW2 | Positive | 4999702 - 5001330 | 58621.6 |
| nad-dependent succinate-semialdehyde dehydrogenase | VEIS_RS21865 | Not Available | Positive | 5001332 - 5002765 | 50637.0 |
| abc transporter atp-binding protein | VEIS_RS21870 | P55604 | Positive | 5002783 - 5003841 | 38752.1 |
| fad-dependent oxidoreductase | VEIS_RS21875 | Not Available | Positive | 5003838 - 5005169 | 47557.2 |
| dihydroxy-acid dehydratase | VEIS_RS21880 | B1I250 | Positive | 5005197 - 5006885 | 58479.1 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS21885 | Not Available | Negative | 5006896 - 5007069 | 6192.72 |
| is3 family transposase | VEIS_RS21890 | Not Available | Negative | 5007354 - 5008540 | 45296.5 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30870 | Not Available | Positive | 5008603 - 5008818 | 7821.39 |
| ybfb/yjij family mfs transporter | VEIS_RS21905 | Not Available | Negative | 5009198 - 5010376 | 40487.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
