Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | VEIS_RS21775 | Q97U27 | Positive | 4979327 - 4980430 | 41350.3 |
| aldehyde dehydrogenase family protein | VEIS_RS21780 | A4VKC2 | Positive | 4980427 - 4981917 | 51698.8 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30855 | Not Available | Positive | 4981980 - 4982171 | 7317.83 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30860 | Not Available | Positive | 4982171 - 4982362 | 7951.75 |
| duf4917 family protein | VEIS_RS21785 | Not Available | Positive | 4982559 - 4983563 | 38437.9 |
| is630 family transposase | VEIS_RS21790 | Not Available | Negative | 4983746 - 4984507 | 28855.8 |
| laci family dna-binding transcriptional regulator | VEIS_RS29260 | A1JP52 | Negative | 4984641 - 4985738 | 39196.7 |
| abc transporter substrate-binding protein | VEIS_RS21800 | Not Available | Positive | 4985884 - 4986999 | 40304.0 |
| abc transporter atp-binding protein | VEIS_RS21805 | Not Available | Positive | 4986996 - 4987793 | 28624.7 |
| abc transporter permease | VEIS_RS21810 | P40401 | Positive | 4987790 - 4988602 | 29140.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
