Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine--trna ligase | VEIS_RS21680 | A1WRC4 | Positive | 4951437 - 4953512 | 76299.1 |
| atp-binding protein | VEIS_RS21685 | A5W4E3 | Negative | 4953522 - 4955735 | 78537.8 |
| atp-dependent clp protease atp-binding subunit clpa | VEIS_RS21690 | P0ABI1 | Negative | 4955796 - 4958147 | 86054.4 |
| atp-dependent clp protease adapter clps | VEIS_RS21695 | A1WRC7 | Negative | 4958208 - 4958558 | 12685.4 |
| dna polymerase iii subunit alpha | VEIS_RS21700 | Q9JXZ2 | Negative | 4958629 - 4962189 | 130622.0 |
| outer membrane protein assembly factor bamd | VEIS_RS21705 | Q9JVB7 | Positive | 4962326 - 4963123 | 29777.3 |
| atp-dependent dna helicase | VEIS_RS21710 | P76257 | Negative | 4963086 - 4965230 | 75785.5 |
| pp2c family serine/threonine-protein phosphatase | VEIS_RS21715 | O34779 | Positive | 4965445 - 4966275 | 30201.6 |
| hypothetical protein | VEIS_RS21720 | Not Available | Negative | 4966301 - 4966579 | 9960.67 |
| aspartate/glutamate racemase family protein | VEIS_RS21725 | Not Available | Negative | 4966733 - 4967521 | 28781.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
