Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | VEIS_RS21630 | Not Available | Negative | 4941638 - 4942531 | 30647.8 |
| abc transporter substrate-binding protein | VEIS_RS21635 | Not Available | Negative | 4942596 - 4943717 | 39520.3 |
| aspartate/glutamate racemase family protein | VEIS_RS21640 | Not Available | Negative | 4943717 - 4944592 | 30901.4 |
| d-amino acid dehydrogenase | VEIS_RS21645 | Q98B75 | Negative | 4944576 - 4945829 | 45746.1 |
| rida family protein | VEIS_RS21650 | P71394 | Negative | 4945834 - 4946187 | 12396.9 |
| hypothetical protein | VEIS_RS21655 | Not Available | Positive | 4946471 - 4946731 | 9258.87 |
| rna polymerase sigma factor rpoh | VEIS_RS21660 | P44404 | Positive | 4946890 - 4947831 | 34713.7 |
| is110 family transposase | VEIS_RS21665 | Not Available | Negative | 4947946 - 4948896 | 34218.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS21670 | Not Available | Positive | 4949125 - 4950114 | 34364.6 |
| patatin-like phospholipase family protein | VEIS_RS21675 | Not Available | Positive | 4950124 - 4951401 | 45484.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
