Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase iron-sulfur subunit | VEIS_RS21035 | Q8ZQU2 | Negative | 4794500 - 4795204 | 26563.2 |
| succinate dehydrogenase flavoprotein subunit | VEIS_RS21040 | Q68XN9 | Negative | 4795233 - 4797038 | 65372.8 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | VEIS_RS21045 | P0AC45 | Negative | 4797065 - 4797433 | 13757.4 |
| succinate dehydrogenase, cytochrome b556 subunit | VEIS_RS21050 | Not Available | Negative | 4797478 - 4797912 | 16181.2 |
| gntr family transcriptional regulator | VEIS_RS21055 | P45544 | Negative | 4798082 - 4798852 | 28515.3 |
| malate dehydrogenase | VEIS_RS21060 | A1WR02 | Positive | 4799059 - 4800045 | 34728.9 |
| hypothetical protein | VEIS_RS21065 | Not Available | Positive | 4800063 - 4800725 | 22747.7 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | VEIS_RS21070 | Q9I2V5 | Positive | 4800792 - 4803383 | 92143.1 |
| transcription-repair coupling factor | VEIS_RS21075 | P30958 | Negative | 4803423 - 4806896 | 127697.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | VEIS_RS21080 | Q21YT7 | Positive | 4807201 - 4808049 | 28882.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
