Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS28060 | Not Available | Negative | 482632 - 482823 | 6644.85 |
| helix-turn-helix domain-containing protein | VEIS_RS02095 | Not Available | Negative | 482823 - 484049 | 44125.9 |
| pqq-dependent dehydrogenase, methanol/ethanol family | VEIS_RS02100 | Q46444 | Positive | 484183 - 486303 | 76551.3 |
| caib/baif coa-transferase family protein | VEIS_RS02105 | P76518 | Negative | 486727 - 487905 | 42092.0 |
| enoyl-coa hydratase/isomerase family protein | VEIS_RS02110 | Q8Z9L5 | Negative | 488039 - 488827 | 28162.2 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS02115 | Not Available | Negative | 488811 - 489803 | 34887.9 |
| lysr family transcriptional regulator | VEIS_RS24595 | P55619 | Positive | 490065 - 491051 | 36156.2 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS02125 | Not Available | Positive | 491177 - 492148 | 33681.9 |
| caib/baif coa-transferase family protein | VEIS_RS02130 | O06543 | Negative | 492363 - 493463 | 38267.9 |
| lysr family transcriptional regulator | VEIS_RS02135 | Not Available | Negative | 493751 - 494662 | 32198.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
