Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase family protein | VEIS_RS20640 | I6Y3T7 | Negative | 4705181 - 4706326 | 40493.9 |
| enoyl-coa hydratase/isomerase family protein | VEIS_RS20645 | Q9KJE7 | Negative | 4706345 - 4707121 | 27792.0 |
| mmge/prpd family protein | VEIS_RS20650 | Not Available | Negative | 4707134 - 4708498 | 47729.5 |
| caib/baif coa-transferase family protein | VEIS_RS20655 | Q9KJE9 | Negative | 4708495 - 4709715 | 43773.1 |
| caib/baif coa-transferase family protein | VEIS_RS20660 | Q9KJF0 | Negative | 4709712 - 4710962 | 44487.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS20665 | Not Available | Positive | 4711166 - 4712185 | 36074.7 |
| hypothetical protein | VEIS_RS29950 | Not Available | Positive | 4712253 - 4712597 | 12082.6 |
| ribbon-helix-helix domain-containing protein | VEIS_RS20670 | Not Available | Positive | 4712640 - 4712879 | 8921.43 |
| putative toxin-antitoxin system toxin component, pin family | VEIS_RS20675 | Not Available | Positive | 4712879 - 4713298 | 15402.6 |
| hypothetical protein | VEIS_RS29955 | Not Available | Negative | 4713273 - 4713449 | 6258.81 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
