Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | VEIS_RS20425 | Q21TP7 | Positive | 4645889 - 4646509 | 23169.6 |
| dna-directed rna polymerase subunit omega | VEIS_RS20430 | A1WQL7 | Positive | 4646541 - 4646744 | 7429.29 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | VEIS_RS20435 | Q9KNM2 | Positive | 4646848 - 4649136 | 84433.5 |
| hypothetical protein | VEIS_RS29195 | Not Available | Positive | 4649239 - 4649382 | 5326.57 |
| eve domain-containing protein | VEIS_RS20440 | P96624 | Negative | 4649435 - 4649878 | 16658.1 |
| age family epimerase/isomerase | VEIS_RS27015 | F2JVT6 | Negative | 4649961 - 4651133 | 44742.3 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS20445 | Q21ZD5 | Negative | 4651242 - 4652795 | 56316.4 |
| hypothetical protein | VEIS_RS29200 | Not Available | Positive | 4652932 - 4653108 | 6526.15 |
| glucose-6-phosphate dehydrogenase | VEIS_RS20450 | Q9Z3S2 | Positive | 4653142 - 4654596 | 54284.9 |
| vtt domain-containing protein | VEIS_RS20455 | P0ABP7 | Negative | 4654572 - 4655234 | 24833.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
