Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | VEIS_RS20385 | Not Available | Negative | 4636848 - 4637789 | 32882.0 |
| branched-chain amino acid abc transporter permease | VEIS_RS20390 | Not Available | Negative | 4637892 - 4638806 | 31921.5 |
| abc transporter substrate-binding protein | VEIS_RS20395 | Not Available | Negative | 4638803 - 4639969 | 41295.3 |
| thiamine pyrophosphate-binding protein | VEIS_RS20400 | P0DUV9 | Negative | 4639939 - 4641537 | 55761.4 |
| fumarylacetoacetate hydrolase family protein | VEIS_RS20405 | Q6GLT8 | Negative | 4641585 - 4642526 | 33489.1 |
| cupin domain-containing protein | VEIS_RS20410 | Q9S3U6 | Negative | 4642605 - 4643768 | 43014.8 |
| flavin reductase family protein | VEIS_RS20415 | Q9KAK9 | Positive | 4644017 - 4644571 | 20161.9 |
| helix-turn-helix domain-containing protein | VEIS_RS20420 | Not Available | Negative | 4644568 - 4645059 | 19167.3 |
| hypothetical protein | VEIS_RS29185 | Not Available | Negative | 4645121 - 4645273 | 5528.83 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS29190 | Not Available | Negative | 4645426 - 4645547 | 4264.22 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
