Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc/yloc family endoribonuclease | VEIS_RS20140 | P44726 | Positive | 4576169 - 4577086 | 33664.6 |
| site-specific integrase | VEIS_RS20145 | P37317 | Positive | 4577297 - 4578556 | 47840.7 |
| dna-binding protein | VEIS_RS20150 | Not Available | Positive | 4578609 - 4578920 | 11478.2 |
| helix-turn-helix domain-containing protein | VEIS_RS20155 | O69717 | Positive | 4579026 - 4579493 | 17118.7 |
| pin domain-containing protein | VEIS_RS20160 | Not Available | Positive | 4579490 - 4580065 | 21376.7 |
| hypothetical protein | VEIS_RS20165 | Not Available | Negative | 4580135 - 4580539 | 15258.1 |
| integrase domain-containing protein | VEIS_RS20170 | Not Available | Negative | 4580576 - 4581583 | 37738.2 |
| hypothetical protein | VEIS_RS20175 | Not Available | Positive | 4582360 - 4582887 | 19970.6 |
| fic family protein | VEIS_RS20180 | Q6AY47 | Positive | 4582999 - 4584054 | 40026.9 |
| bptd_3080 family restriction endonuclease | VEIS_RS20185 | Not Available | Positive | 4584085 - 4587147 | 115515.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
