Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropyrimidinase | VEIS_RS20090 | Q9I676 | Negative | 4564906 - 4566357 | 51836.6 |
| ncs1 family nucleobase:cation symporter-1 | VEIS_RS20095 | Q9LZD0 | Negative | 4566371 - 4567852 | 53205.8 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | VEIS_RS20100 | Q8ZNL7 | Negative | 4567932 - 4569242 | 47275.1 |
| nad(p)-dependent oxidoreductase | VEIS_RS20105 | Q8X645 | Negative | 4569255 - 4570688 | 49549.3 |
| tetr/acrr family transcriptional regulator | VEIS_RS20110 | Q8X4Z7 | Positive | 4570850 - 4571554 | 26103.3 |
| i78 family peptidase inhibitor | VEIS_RS20115 | Not Available | Positive | 4571705 - 4572052 | 11305.7 |
| radical sam family heme chaperone hemw | VEIS_RS20120 | P52062 | Negative | 4572142 - 4573392 | 45786.1 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | VEIS_RS20125 | A1WQF4 | Negative | 4573422 - 4574021 | 21092.4 |
| pp2c family serine/threonine-protein phosphatase | VEIS_RS20130 | Not Available | Negative | 4574174 - 4575073 | 32754.9 |
| serine/threonine-protein kinase | VEIS_RS20135 | A6QGC0 | Negative | 4575070 - 4576092 | 38235.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
