Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d,d-dipeptide abc transporter permease | VEIS_RS19945 | P77463 | Negative | 4518209 - 4519057 | 30328.7 |
| abc transporter permease | VEIS_RS19950 | P77308 | Negative | 4519059 - 4520075 | 35931.7 |
| abc transporter substrate-binding protein | VEIS_RS19955 | P76128 | Negative | 4520121 - 4521686 | 56691.8 |
| murr/rpir family transcriptional regulator | VEIS_RS19960 | Not Available | Negative | 4521753 - 4522646 | 33391.0 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | VEIS_RS19965 | D2D3B2 | Positive | 4523036 - 4523740 | 25174.8 |
| hypothetical protein | VEIS_RS29150 | Not Available | Negative | 4523759 - 4524130 | 13962.5 |
| dna-binding transcriptional regulator | VEIS_RS19970 | Not Available | Negative | 4524120 - 4524410 | 10596.7 |
| type ii toxin-antitoxin system rele/pare family toxin | VEIS_RS19975 | Q9KMA6 | Negative | 4524412 - 4524765 | 12874.5 |
| hypothetical protein | VEIS_RS26945 | Not Available | Negative | 4524832 - 4524984 | 5546.87 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS19980 | Q9HI37 | Positive | 4525511 - 4526260 | 27666.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
