Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | VEIS_RS19890 | Not Available | Positive | 4508107 - 4509084 | 33671.5 |
| abc transporter atp-binding protein | VEIS_RS19895 | P21629 | Positive | 4509081 - 4509800 | 25610.2 |
| abc transporter atp-binding protein | VEIS_RS19900 | Not Available | Positive | 4509797 - 4510543 | 26178.1 |
| abc transporter substrate-binding protein | VEIS_RS19905 | Q8FWP6 | Positive | 4510610 - 4511797 | 41821.5 |
| dihydrodipicolinate synthase family protein | VEIS_RS19915 | B4U7D7 | Positive | 4512013 - 4513365 | 48339.6 |
| sdr family oxidoreductase | VEIS_RS19920 | A5W4G5 | Positive | 4513399 - 4514178 | 27396.8 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS19925 | Not Available | Positive | 4514235 - 4515245 | 36265.1 |
| d-alanyl-d-alanine dipeptidase | VEIS_RS19930 | P74268 | Negative | 4515423 - 4515995 | 21125.3 |
| oligopeptide/dipeptide abc transporter atp-binding protein | VEIS_RS19935 | P77622 | Negative | 4516000 - 4516998 | 35989.6 |
| abc transporter atp-binding protein | VEIS_RS19940 | P77268 | Negative | 4516995 - 4518212 | 42692.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
