Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna internalization-related competence protein comec/rec2 | VEIS_RS02000 | P51973 | Positive | 454549 - 457176 | 93164.1 |
| circularly permuted type 2 atp-grasp protein | VEIS_RS02005 | Q55587 | Positive | 457268 - 458725 | 54095.3 |
| alpha-e domain-containing protein | VEIS_RS02010 | Not Available | Positive | 458719 - 459678 | 36287.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS02015 | Not Available | Positive | 459809 - 460930 | 39600.9 |
| mmge/prpd family protein | VEIS_RS02020 | Not Available | Positive | 460974 - 462344 | 48512.4 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS28055 | Not Available | Negative | 462430 - 462612 | 7339.66 |
| abc transporter substrate-binding protein | VEIS_RS02025 | Not Available | Positive | 462897 - 464459 | 57099.1 |
| abc transporter permease | VEIS_RS02030 | P0AEG0 | Positive | 464459 - 465406 | 34219.2 |
| abc transporter permease | VEIS_RS02035 | Not Available | Positive | 465414 - 466244 | 28913.5 |
| abc transporter atp-binding protein | VEIS_RS02040 | Q3Z3V4 | Positive | 466241 - 467833 | 57107.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
