Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | VEIS_RS19750 | B9MI90 | Negative | 4470960 - 4472198 | 42545.5 |
| azld domain-containing protein | VEIS_RS19755 | Not Available | Negative | 4472558 - 4472893 | 12313.5 |
| azlc family abc transporter permease | VEIS_RS19760 | Not Available | Negative | 4473058 - 4473834 | 28380.6 |
| methionyl-trna formyltransferase | VEIS_RS19765 | A1WQ79 | Negative | 4473831 - 4474823 | 34394.8 |
| peptide deformylase | VEIS_RS19770 | Q7WQS9 | Negative | 4474867 - 4475379 | 19345.6 |
| lysm peptidoglycan-binding domain-containing protein | VEIS_RS19775 | Not Available | Positive | 4475587 - 4476828 | 44219.6 |
| dna-processing protein dpra | VEIS_RS19780 | P30852 | Positive | 4476899 - 4478098 | 40475.9 |
| duf1631 domain-containing protein | VEIS_RS19785 | Not Available | Negative | 4478111 - 4480465 | 86188.6 |
| protein translocase subunit secf | VEIS_RS19790 | P44590 | Negative | 4480499 - 4481464 | 35381.7 |
| protein translocase subunit secd | VEIS_RS19795 | P0AG91 | Negative | 4481477 - 4483387 | 68315.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
