Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha family protein | VEIS_RS19610 | O87386 | Positive | 4437361 - 4440378 | 108432.0 |
| sarcosine oxidase subunit gamma | VEIS_RS19615 | Not Available | Positive | 4440371 - 4441027 | 23234.2 |
| dipeptidase | VEIS_RS19620 | E9CV02 | Positive | 4441076 - 4442047 | 35919.0 |
| glycine betaine abc transporter substrate-binding protein | VEIS_RS19625 | Q9RR44 | Positive | 4442047 - 4442952 | 32352.2 |
| duf5943 domain-containing protein | VEIS_RS19630 | Not Available | Positive | 4442989 - 4443591 | 21521.5 |
| nadh:flavin oxidoreductase | VEIS_RS19635 | O87278 | Positive | 4443569 - 4445629 | 75130.1 |
| (fe-s)-binding protein | VEIS_RS19640 | P45866 | Positive | 4445631 - 4447529 | 67148.0 |
| electron transfer flavoprotein subunit alpha/fixb family protein | VEIS_RS19645 | O33096 | Positive | 4447526 - 4448914 | 46664.4 |
| hypothetical protein | VEIS_RS19650 | Not Available | Positive | 4448935 - 4449714 | 26851.9 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | VEIS_RS19655 | Not Available | Positive | 4449737 - 4451002 | 47822.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
