Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VEIS_RS19130 | Not Available | Positive | 4335375 - 4336532 | 40708.3 |
| branched-chain amino acid abc transporter permease | VEIS_RS19135 | Not Available | Positive | 4336544 - 4337626 | 37932.1 |
| abc transporter permease subunit | VEIS_RS19140 | Not Available | Positive | 4337674 - 4339500 | 64703.8 |
| trap transporter substrate-binding protein | VEIS_RS19145 | A1WPV4 | Positive | 4339896 - 4340903 | 36408.8 |
| trap transporter small permease | VEIS_RS19150 | Not Available | Positive | 4341002 - 4341496 | 18291.0 |
| trap transporter large permease | VEIS_RS19155 | Q9HU16 | Positive | 4341493 - 4342770 | 44550.6 |
| glycine cleavage system aminomethyltransferase gcvt | VEIS_RS19160 | Q54DD3 | Positive | 4343070 - 4344200 | 39412.1 |
| glycine cleavage system protein gcvh | VEIS_RS19165 | Q7NSJ4 | Positive | 4344238 - 4344612 | 12964.1 |
| aminomethyl-transferring glycine dehydrogenase | VEIS_RS19170 | C5CRW8 | Positive | 4344642 - 4347554 | 104096.0 |
| hypothetical protein | VEIS_RS30770 | Not Available | Negative | 4347597 - 4347842 | 8418.12 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
