Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | VEIS_RS18500 | O86042 | Positive | 4219847 - 4220542 | 24869.9 |
| nudix hydrolase | VEIS_RS18505 | Not Available | Positive | 4220661 - 4221212 | 20687.8 |
| type iv pilin protein | VEIS_RS18510 | Not Available | Negative | 4221298 - 4221792 | 18545.1 |
| pilus assembly protein | VEIS_RS18515 | Q87B49 | Negative | 4221789 - 4226864 | 180875.0 |
| pilx n-terminal domain-containing pilus assembly protein | VEIS_RS18520 | Not Available | Negative | 4226777 - 4227553 | 28407.4 |
| pilw family protein | VEIS_RS18525 | Not Available | Negative | 4227565 - 4228713 | 41178.7 |
| type iv pilus modification protein pilv | VEIS_RS26850 | Not Available | Negative | 4228719 - 4229396 | 24180.0 |
| gsph/fimt family pseudopilin | VEIS_RS18535 | Not Available | Negative | 4229410 - 4230078 | 24501.6 |
| hypothetical protein | VEIS_RS26855 | Not Available | Positive | 4230520 - 4230744 | 8051.98 |
| deor/glpr family dna-binding transcription regulator | VEIS_RS18540 | Not Available | Negative | 4231105 - 4232181 | 39538.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
