Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | VEIS_RS18240 | O33945 | Positive | 4159041 - 4159919 | 31998.0 |
| type ii toxin-antitoxin system vapc family toxin | VEIS_RS18245 | Q52562 | Negative | 4160108 - 4160530 | 15111.3 |
| fita-like ribbon-helix-helix domain-containing protein | VEIS_RS18250 | Q52561 | Negative | 4160527 - 4160781 | 9508.56 |
| hypothetical protein | VEIS_RS30735 | Not Available | Negative | 4160844 - 4161104 | 9396.24 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS18260 | P55501 | Negative | 4161437 - 4161781 | 13477.9 |
| glutathione binding-like protein | VEIS_RS18265 | P77526 | Negative | 4162162 - 4162854 | 25945.0 |
| galactonate dehydratase | VEIS_RS18270 | A1WPC7 | Negative | 4163057 - 4164205 | 42166.8 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | VEIS_RS18275 | Q6BF16 | Negative | 4164202 - 4164828 | 21562.3 |
| sdr family oxidoreductase | VEIS_RS18280 | Q9LBG2 | Negative | 4164838 - 4165614 | 27639.2 |
| l-arabinose abc transporter permease arah | VEIS_RS18285 | P0AE26 | Negative | 4165622 - 4166569 | 32686.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
