Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s8 family peptidase | VEIS_RS18100 | Not Available | Positive | 4131388 - 4133610 | 80914.6 |
| rna polymerase sigma factor | VEIS_RS18105 | Not Available | Positive | 4133665 - 4134444 | 29010.6 |
| hypothetical protein | VEIS_RS18110 | Not Available | Positive | 4134441 - 4135034 | 21383.3 |
| uvrd-helicase domain-containing protein | VEIS_RS18115 | Not Available | Positive | 4135038 - 4138466 | 125330.0 |
| multiubiquitin domain-containing protein | VEIS_RS18120 | Not Available | Positive | 4138566 - 4139495 | 34339.6 |
| thif family adenylyltransferase | VEIS_RS18125 | Not Available | Positive | 4139495 - 4140901 | 49669.6 |
| duf6527 family protein | VEIS_RS30730 | Not Available | Positive | 4141057 - 4141239 | 6867.25 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS18135 | Not Available | Negative | 4141433 - 4142722 | 48166.0 |
| hypothetical protein | VEIS_RS18140 | Not Available | Positive | 4142849 - 4143412 | 20887.1 |
| helix-turn-helix domain-containing protein | VEIS_RS18145 | Not Available | Positive | 4143585 - 4144040 | 17024.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
