Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VEIS_RS17640 | Not Available | Positive | 4027053 - 4027880 | 29677.2 |
| abc transporter atp-binding protein | VEIS_RS17645 | Not Available | Positive | 4027877 - 4028656 | 28601.6 |
| histidine utilization repressor | VEIS_RS17650 | Q9HU78 | Positive | 4028684 - 4029454 | 28622.5 |
| histidine ammonia-lyase | VEIS_RS17655 | A1TRE4 | Positive | 4029505 - 4031067 | 53466.9 |
| urocanate hydratase | VEIS_RS17660 | Q8XW28 | Positive | 4031129 - 4032850 | 61727.5 |
| hutd family protein | VEIS_RS17665 | A8AHD3 | Positive | 4033028 - 4033717 | 24028.7 |
| imidazolonepropionase | VEIS_RS17670 | A1WP07 | Positive | 4033795 - 4035165 | 47814.9 |
| formimidoylglutamate deiminase | VEIS_RS17675 | Q9HU77 | Positive | 4035155 - 4036588 | 51199.2 |
| n-formylglutamate deformylase | VEIS_RS17680 | Not Available | Positive | 4036658 - 4037479 | 29756.5 |
| serine--trna ligase | VEIS_RS17685 | A1WP10 | Positive | 4037576 - 4038892 | 47822.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
