Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl coa:acetate/3-ketoacid coa transferase | VEIS_RS17300 | F1CYZ5 | Positive | 3946751 - 3948349 | 56371.2 |
| enoyl-coa hydratase/isomerase family protein | VEIS_RS17305 | Not Available | Positive | 3948339 - 3949127 | 28160.8 |
| aldehyde dehydrogenase family protein | VEIS_RS17310 | P71016 | Positive | 3949176 - 3950666 | 52831.3 |
| abc transporter substrate-binding protein | VEIS_RS17315 | Q92KZ7 | Positive | 3950715 - 3951959 | 44277.0 |
| carbohydrate abc transporter permease | VEIS_RS17320 | O58968 | Positive | 3952063 - 3952929 | 31741.7 |
| carbohydrate abc transporter permease | VEIS_RS17325 | O58967 | Positive | 3952922 - 3953806 | 32334.2 |
| abc transporter atp-binding protein | VEIS_RS17330 | O32151 | Positive | 3953817 - 3954938 | 40519.7 |
| gmc oxidoreductase | VEIS_RS17335 | Q3YAT3 | Positive | 3954955 - 3956463 | 55436.6 |
| 3-ketoacyl-acp reductase | VEIS_RS17340 | Q5TJF5 | Positive | 3956460 - 3957251 | 27424.2 |
| gmc family oxidoreductase | VEIS_RS17345 | Q47944 | Positive | 3957273 - 3958892 | 57919.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
