Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol dehydrogenase family protein | VEIS_RS17250 | P39160 | Negative | 3936210 - 3937739 | 54675.8 |
| d-mannonate dehydratase mand | VEIS_RS17255 | A5V6Z0 | Negative | 3937759 - 3938970 | 45278.9 |
| amino acid abc transporter atp-binding protein | VEIS_RS17260 | Not Available | Negative | 3939047 - 3939820 | 28154.1 |
| amino acid abc transporter permease | VEIS_RS17265 | Not Available | Negative | 3939817 - 3940476 | 24452.8 |
| amino acid abc transporter permease | VEIS_RS17270 | Not Available | Negative | 3940526 - 3941191 | 24221.5 |
| l-idonate 5-dehydrogenase | VEIS_RS17275 | P39346 | Negative | 3941232 - 3942269 | 36321.0 |
| abc transporter substrate-binding protein | VEIS_RS17280 | Not Available | Negative | 3942283 - 3943101 | 29164.3 |
| fadr/gntr family transcriptional regulator | VEIS_RS17285 | Not Available | Negative | 3943302 - 3944039 | 27310.5 |
| laci family dna-binding transcriptional regulator | VEIS_RS17290 | P44329 | Positive | 3944457 - 3945476 | 36600.6 |
| gfo/idh/moca family protein | VEIS_RS17295 | Q92KZ3 | Positive | 3945612 - 3946649 | 35927.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
