Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VEIS_RS28975 | Not Available | Negative | 3925607 - 3926032 | 16194.8 |
| duf4411 family protein | VEIS_RS17205 | Not Available | Negative | 3926041 - 3926532 | 18316.1 |
| imma/irre family metallo-endopeptidase | VEIS_RS17210 | Not Available | Negative | 3926529 - 3927686 | 43272.2 |
| type i restriction endonuclease subunit r | VEIS_RS17215 | Q6GCT1 | Negative | 3927676 - 3930630 | 112907.0 |
| polysaccharide deacetylase family protein | VEIS_RS17220 | Not Available | Positive | 3930794 - 3931735 | 35204.0 |
| polysaccharide deacetylase | VEIS_RS17225 | Not Available | Negative | 3931965 - 3932885 | 34475.9 |
| sdr family nad(p)-dependent oxidoreductase | VEIS_RS17230 | Q68VY7 | Negative | 3932900 - 3933652 | 25953.0 |
| ketopantoate reductase family protein | VEIS_RS17235 | Not Available | Negative | 3933642 - 3934673 | 37692.5 |
| hypothetical protein | VEIS_RS28980 | Not Available | Negative | 3934690 - 3935169 | 17584.2 |
| sugar kinase | VEIS_RS17245 | P50845 | Negative | 3935191 - 3936213 | 35815.7 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
