Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS17115 | Not Available | Negative | 3900550 - 3901515 | 33757.9 |
| gamma-glutamyltransferase family protein | VEIS_RS17120 | O05218 | Negative | 3901557 - 3903392 | 66239.2 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | VEIS_RS17125 | Q02252 | Positive | 3903671 - 3905194 | 53554.0 |
| sugar abc transporter atp-binding protein | VEIS_RS17130 | Q1AXG5 | Negative | 3905198 - 3906766 | 57092.9 |
| strictosidine synthase | VEIS_RS17135 | Not Available | Negative | 3906763 - 3907965 | 42271.8 |
| abc transporter permease subunit | VEIS_RS17140 | Q9SD07 | Negative | 3907965 - 3910079 | 76807.8 |
| sugar abc transporter substrate-binding protein | VEIS_RS17145 | Not Available | Negative | 3910153 - 3911166 | 35354.6 |
| abc transporter permease | VEIS_RS17150 | Not Available | Negative | 3911334 - 3912305 | 33799.9 |
| acyl-coa dehydrogenase family protein | VEIS_RS17155 | Q9UKU7 | Positive | 3912693 - 3913853 | 41360.6 |
| 3-hydroxyisobutyrate dehydrogenase | VEIS_RS17160 | P28811 | Positive | 3913985 - 3914884 | 30067.4 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
