Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system major pseudopilin gspg | VEIS_RS17070 | Not Available | Positive | 3892346 - 3892798 | 16488.1 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VEIS_RS17075 | Not Available | Positive | 3892801 - 3893289 | 17409.2 |
| type ii secretion system minor pseudopilin gspi | VEIS_RS17080 | Not Available | Positive | 3893289 - 3893648 | 13019.1 |
| hypothetical protein | VEIS_RS29855 | Not Available | Negative | 3893642 - 3893863 | 6683.79 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | VEIS_RS17085 | Not Available | Positive | 3893824 - 3894507 | 25202.2 |
| type ii secretion system minor pseudopilin gspk | VEIS_RS17090 | Not Available | Positive | 3894504 - 3895520 | 36513.6 |
| type ii secretion system protein gspl | VEIS_RS17095 | Not Available | Positive | 3895626 - 3896876 | 43535.0 |
| type ii secretion system protein gspm | VEIS_RS17100 | Not Available | Positive | 3896873 - 3897466 | 20512.8 |
| type ii secretion system protein n | VEIS_RS17105 | Not Available | Positive | 3897533 - 3898336 | 28072.0 |
| type ii secretion system secretin gspd | VEIS_RS17110 | P35818 | Positive | 3898341 - 3900563 | 76456.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
