Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | VEIS_RS01730 | Not Available | Negative | 392931 - 394355 | 50335.4 |
| flotillin family protein | VEIS_RS01735 | P77306 | Positive | 394935 - 396563 | 58990.7 |
| abc transporter substrate-binding protein | VEIS_RS01740 | Not Available | Positive | 396560 - 397783 | 44115.2 |
| branched-chain amino acid abc transporter permease | VEIS_RS01745 | Not Available | Positive | 397890 - 398762 | 29993.9 |
| branched-chain amino acid abc transporter permease | VEIS_RS01750 | Not Available | Positive | 398759 - 399820 | 37191.5 |
| abc transporter atp-binding protein | VEIS_RS01755 | P0A194 | Positive | 399810 - 400541 | 26178.9 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30140 | P21630 | Positive | 400607 - 401038 | 15221.0 |
| amidase | VEIS_RS30145 | P27765 | Positive | 401405 - 402919 | 54059.1 |
| amp-binding protein | VEIS_RS01765 | Q0P4F7 | Positive | 402940 - 404646 | 61844.1 |
| recombinase reca | VEIS_RS01770 | A9BQB0 | Negative | 404799 - 405902 | 38836.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
