Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | VEIS_RS16935 | P76082 | Negative | 3864764 - 3865501 | 26355.2 |
| acetate--coa ligase family protein | VEIS_RS16940 | Not Available | Negative | 3865547 - 3867682 | 74053.8 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS16945 | Not Available | Negative | 3867706 - 3868689 | 34293.6 |
| dna ligase | VEIS_RS16950 | P44121 | Positive | 3868952 - 3869797 | 31114.2 |
| arginine/lysine/ornithine decarboxylase | VEIS_RS16955 | Q9I2S7 | Negative | 3869870 - 3872188 | 86807.8 |
| nfed family protein | VEIS_RS16960 | Not Available | Positive | 3872354 - 3872779 | 14802.1 |
| spfh domain-containing protein | VEIS_RS16965 | Q99JB2 | Positive | 3872807 - 3873727 | 33434.5 |
| Trna-ser | Not Available | Not Available | Positive | 3873822 - 3873911 | Not Available |
| lysr family transcriptional regulator | VEIS_RS16975 | Not Available | Negative | 3873981 - 3874895 | 33490.9 |
| ferredoxin | VEIS_RS16980 | P13279 | Negative | 3874926 - 3875267 | 11685.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
