Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | VEIS_RS16890 | Not Available | Negative | 3849801 - 3851594 | 64685.4 |
| lysr family transcriptional regulator | VEIS_RS16895 | P48271 | Positive | 3851607 - 3852521 | 32676.7 |
| type iii restriction-modification system endonuclease | VEIS_RS16900 | Q5ZND2 | Negative | 3852592 - 3855651 | 115149.0 |
| atp-binding protein | VEIS_RS26665 | Not Available | Negative | 3855648 - 3857372 | 63057.7 |
| sir2 family protein | VEIS_RS27820 | Not Available | Negative | 3857369 - 3858649 | 47991.4 |
| snf2-related protein | VEIS_RS16910 | Not Available | Negative | 3858660 - 3860750 | 79796.9 |
| metallophosphoesterase | VEIS_RS16915 | Q58322 | Positive | 3861041 - 3861796 | 27171.6 |
| bifunctional serine/threonine-protein kinase/universal stress protein | VEIS_RS16920 | Q97IC2 | Positive | 3861793 - 3863238 | 52653.6 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS16925 | Not Available | Negative | 3863380 - 3863734 | 12785.0 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS16930 | Not Available | Negative | 3863756 - 3864727 | 34935.2 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
