Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapc family toxin | VEIS_RS16845 | P55511 | Negative | 3842465 - 3842890 | 15337.4 |
| fita-like ribbon-helix-helix domain-containing protein | VEIS_RS16850 | P55510 | Negative | 3842887 - 3843144 | 9515.34 |
| aldo/keto reductase | VEIS_RS16855 | P0A9T4 | Negative | 3843334 - 3844395 | 38416.0 |
| cystathionine beta-lyase | VEIS_RS16860 | Q07703 | Negative | 3844778 - 3845959 | 42035.5 |
| amino acid abc transporter atp-binding protein | VEIS_RS16865 | O34677 | Negative | 3845988 - 3846716 | 26762.7 |
| amino acid abc transporter permease | VEIS_RS16870 | P45768 | Negative | 3846713 - 3847462 | 26702.5 |
| amino acid abc transporter permease | VEIS_RS16875 | P48244 | Negative | 3847455 - 3848150 | 25121.1 |
| hypothetical protein | VEIS_RS28950 | Not Available | Positive | 3848168 - 3848350 | 6620.01 |
| abc transporter substrate-binding protein | VEIS_RS16880 | P37902 | Negative | 3848325 - 3849149 | 29295.6 |
| cysteine dioxygenase family protein | VEIS_RS16885 | Not Available | Negative | 3849178 - 3849804 | 23073.3 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
