Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yajq family cyclic di-gmp-binding protein | VEIS_RS16805 | A1WNH8 | Positive | 3837299 - 3837784 | 18090.8 |
| tigr02281 family clan aa aspartic protease | VEIS_RS16810 | Not Available | Positive | 3837825 - 3838499 | 24209.4 |
| hd-gyp domain-containing protein | VEIS_RS16815 | Not Available | Positive | 3838508 - 3839500 | 35981.0 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | VEIS_RS16820 | Q21UZ2 | Negative | 3839510 - 3840130 | 21242.6 |
| replication initiator protein a | VEIS_RS29835 | Not Available | Negative | 3840750 - 3841169 | 15533.0 |
| type ii toxin-antitoxin system rele/pare family toxin | VEIS_RS16830 | Not Available | Positive | 3841239 - 3841589 | 13257.5 |
| xre family transcriptional regulator | VEIS_RS16835 | Not Available | Positive | 3841586 - 3841879 | 10666.1 |
| hypothetical protein | VEIS_RS28940 | Not Available | Negative | 3841890 - 3842036 | 5388.36 |
| hypothetical protein | VEIS_RS28945 | Not Available | Negative | 3842040 - 3842198 | 5909.89 |
| hypothetical protein | VEIS_RS16840 | Not Available | Negative | 3842292 - 3842468 | 6598.83 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
