Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VEIS_RS16665 | P0C2L2 | Positive | 3806930 - 3807778 | 30008.4 |
| amp-binding protein | VEIS_RS16670 | A0A6B9HER0 | Positive | 3807823 - 3809583 | 63876.6 |
| amp-binding protein | VEIS_RS16675 | Not Available | Positive | 3809597 - 3811339 | 63129.7 |
| fumarylacetoacetate hydrolase family protein | VEIS_RS16680 | Q3TC72 | Negative | 3811636 - 3812475 | 30081.1 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS16685 | Not Available | Negative | 3812485 - 3813468 | 35255.6 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | VEIS_RS16690 | A6TAC9 | Negative | 3813511 - 3815328 | 66320.0 |
| iclr family transcriptional regulator | VEIS_RS16695 | Not Available | Negative | 3815325 - 3816107 | 28357.7 |
| voc family protein | VEIS_RS16700 | Not Available | Negative | 3816115 - 3816972 | 30792.0 |
| hypothetical protein | VEIS_RS28925 | Not Available | Negative | 3817159 - 3817329 | 6078.37 |
| hypothetical protein | VEIS_RS28930 | Not Available | Positive | 3817443 - 3817610 | 6059.01 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
