Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VEIS_RS01680 | P35114 | Positive | 381274 - 381984 | 26198.4 |
| abc transporter atp-binding protein | VEIS_RS01685 | O30506 | Positive | 382006 - 382863 | 31300.9 |
| 5-guanidino-2-oxopentanoate decarboxylase | VEIS_RS01690 | Q9HUI8 | Positive | 382877 - 384607 | 60805.5 |
| class ii aldolase/adducin family protein | VEIS_RS01695 | Q9HYH5 | Positive | 384600 - 385313 | 26442.8 |
| hypothetical protein | VEIS_RS25190 | Not Available | Positive | 385530 - 385682 | 5487.79 |
| ynfa family protein | VEIS_RS01705 | A1WES5 | Negative | 385729 - 386061 | 11907.1 |
| heavy metal sensor histidine kinase | VEIS_RS01710 | Q8XBY4 | Negative | 386365 - 387741 | 50388.8 |
| heavy metal response regulator transcription factor | VEIS_RS01715 | Q44006 | Negative | 387738 - 388433 | 25935.7 |
| efflux rnd transporter permease subunit | VEIS_RS01720 | Q6D2B1 | Negative | 388453 - 391608 | 112760.0 |
| efflux rnd transporter periplasmic adaptor subunit | VEIS_RS01725 | Q7N3E3 | Negative | 391605 - 392759 | 40887.0 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
