Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS16525 | Not Available | Positive | 3777524 - 3778492 | 34135.7 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS16530 | Not Available | Positive | 3778516 - 3779484 | 34156.6 |
| voc family protein | VEIS_RS16535 | Not Available | Positive | 3779548 - 3780015 | 16918.5 |
| plp-dependent transferase | VEIS_RS16540 | Q52811 | Positive | 3780241 - 3781521 | 45410.7 |
| duf2189 domain-containing protein | VEIS_RS16545 | Not Available | Positive | 3781806 - 3782633 | 29159.1 |
| hypothetical protein | VEIS_RS16550 | Not Available | Positive | 3782692 - 3782892 | 6979.05 |
| arylesterase | VEIS_RS16555 | Q9HZY8 | Negative | 3783063 - 3783644 | 20728.1 |
| abc transporter atp-binding protein | VEIS_RS16560 | P0A9T9 | Positive | 3783727 - 3784440 | 25513.9 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | VEIS_RS16565 | Q8Y016 | Positive | 3784544 - 3785290 | 26266.9 |
| sugar abc transporter substrate-binding protein | VEIS_RS16570 | Q9I1E0 | Negative | 3785425 - 3786738 | 47603.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
