Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsd1 family plp-dependent enzyme | VEIS_RS16400 | A1B8Z1 | Negative | 3749160 - 3750278 | 39845.1 |
| transporter substrate-binding domain-containing protein | VEIS_RS16405 | Q0P9X8 | Negative | 3750467 - 3751303 | 30958.7 |
| amino acid abc transporter atp-binding protein | VEIS_RS16410 | P54537 | Negative | 3751359 - 3752144 | 29181.5 |
| amino acid abc transporter permease | VEIS_RS16415 | Not Available | Negative | 3752160 - 3752816 | 24111.8 |
| amino acid abc transporter permease | VEIS_RS16420 | O34671 | Negative | 3752823 - 3753476 | 23553.4 |
| hypothetical protein | VEIS_RS28905 | Not Available | Negative | 3753469 - 3753768 | 10734.0 |
| luxr c-terminal-related transcriptional regulator | VEIS_RS16425 | Q7TXA9 | Negative | 3754342 - 3757077 | 100384.0 |
| hypothetical protein | VEIS_RS29810 | Not Available | Negative | 3757335 - 3757544 | 7690.28 |
| hypothetical protein | VEIS_RS24895 | Not Available | Positive | 3757663 - 3758097 | 15863.0 |
| hypothetical protein | VEIS_RS30685 | Not Available | Positive | 3758097 - 3758429 | 12121.8 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
