Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | VEIS_RS24875 | Not Available | Positive | 3733821 - 3735227 | 51228.5 |
| mfs transporter | VEIS_RS16320 | Not Available | Positive | 3735224 - 3736411 | 40751.7 |
| nucleotidyltransferase domain-containing protein | VEIS_RS16325 | Not Available | Positive | 3736408 - 3737238 | 29943.1 |
| had family hydrolase | VEIS_RS16330 | Q4UVL3 | Positive | 3737235 - 3737900 | 23301.9 |
| lyse family translocator | VEIS_RS16335 | Not Available | Negative | 3738262 - 3738897 | 22526.6 |
| fad-binding protein | VEIS_RS31195 | Not Available | Positive | 3738973 - 3739320 | 11976.8 |
| fad-binding protein | VEIS_RS31200 | P71864 | Positive | 3739421 - 3739846 | 14379.2 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS31205 | Q60A55 | Positive | 3739931 - 3740131 | 7332.76 |
| hypothetical protein | VEIS_RS24890 | Not Available | Positive | 3740225 - 3740893 | 25059.6 |
| Trna-asp | Not Available | Not Available | Positive | 3741704 - 3741780 | Not Available |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
