Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS30670 | Not Available | Negative | 3728064 - 3728363 | 10825.8 |
| hypothetical protein | VEIS_RS28900 | Not Available | Negative | 3728603 - 3728776 | 5928.29 |
| type ii toxin-antitoxin system rele/pare family toxin | VEIS_RS16275 | Not Available | Negative | 3728776 - 3729030 | 9469.33 |
| copg family ribbon-helix-helix protein | VEIS_RS16280 | Not Available | Negative | 3729057 - 3729329 | 10580.4 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS16285 | P22996 | Positive | 3729520 - 3730227 | 25678.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS16290 | Not Available | Positive | 3730547 - 3731124 | 20333.0 |
| hypothetical protein | VEIS_RS16295 | Not Available | Positive | 3731117 - 3731446 | 11799.1 |
| hypothetical protein | VEIS_RS16300 | Not Available | Negative | 3731558 - 3731932 | 14216.2 |
| tyrosine-type recombinase/integrase | VEIS_RS16305 | Not Available | Positive | 3731931 - 3732440 | 19247.0 |
| is630 family transposase | VEIS_RS16310 | Not Available | Positive | 3732747 - 3733808 | 40735.9 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
