Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | VEIS_RS16230 | Not Available | Negative | 3723820 - 3724167 | 12867.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS26600 | Not Available | Negative | 3724133 - 3724529 | 14179.8 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS27800 | Not Available | Negative | 3724631 - 3724795 | 5785.13 |
| repb family plasmid replication initiator protein | VEIS_RS27805 | Not Available | Negative | 3724796 - 3724966 | 6662.1 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | VEIS_RS16240 | Not Available | Positive | 3725209 - 3725472 | 9435.33 |
| type ii toxin-antitoxin system yafq family toxin | VEIS_RS16245 | Not Available | Positive | 3725459 - 3725761 | 11395.7 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS16250 | P06694 | Positive | 3726051 - 3726560 | 18957.0 |
| trfb-related dna-binding protein | VEIS_RS16255 | Not Available | Positive | 3726626 - 3726976 | 12154.7 |
| type ii toxin-antitoxin system rele/pare family toxin | VEIS_RS16260 | P44190 | Positive | 3727050 - 3727382 | 12668.1 |
| addiction module antidote protein | VEIS_RS16265 | Not Available | Positive | 3727379 - 3727690 | 11247.5 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
