Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | VEIS_RS16190 | Not Available | Positive | 3716571 - 3718055 | 53253.0 |
| amino acid abc transporter atp-binding protein | VEIS_RS16195 | Q52815 | Negative | 3718049 - 3718834 | 29195.5 |
| transporter substrate-binding domain-containing protein | VEIS_RS16200 | P27676 | Negative | 3718930 - 3719757 | 29851.1 |
| amino acid abc transporter permease | VEIS_RS16205 | Not Available | Negative | 3719817 - 3720470 | 23484.4 |
| amino acid abc transporter permease | VEIS_RS16210 | P42200 | Negative | 3720480 - 3721151 | 24614.7 |
| laci family dna-binding transcriptional regulator | VEIS_RS16215 | B6EH86 | Positive | 3721381 - 3722406 | 36604.2 |
| hypothetical protein | VEIS_RS30660 | Not Available | Negative | 3722479 - 3722619 | 5268.64 |
| transposase | VEIS_RS30665 | Not Available | Positive | 3722673 - 3723089 | 15593.0 |
| tripartite tricarboxylate transporter substrate-binding protein | VEIS_RS28895 | Not Available | Negative | 3723146 - 3723316 | 6377.78 |
| zeta toxin family protein | VEIS_RS16225 | Not Available | Negative | 3723298 - 3723531 | 8598.45 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
