Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcf | VEIS_RS16090 | P52074 | Negative | 3693930 - 3695168 | 44292.6 |
| glycolate oxidase subunit glce | VEIS_RS16095 | P52073 | Negative | 3695213 - 3696349 | 39860.9 |
| ammonium transporter | VEIS_RS16100 | P69680 | Negative | 3696475 - 3698013 | 52552.6 |
| p-ii family nitrogen regulator | VEIS_RS16105 | Q52905 | Negative | 3698040 - 3698378 | 12361.1 |
| torf family putative porin | VEIS_RS16110 | Not Available | Negative | 3698467 - 3699177 | 24739.5 |
| yifb family mg chelatase-like aaa atpase | VEIS_RS16115 | P45049 | Positive | 3699390 - 3700925 | 53509.4 |
| lysr substrate-binding domain-containing protein | VEIS_RS16120 | P12529 | Positive | 3701055 - 3701957 | 33812.9 |
| mmge/prpd family protein | VEIS_RS26590 | Not Available | Negative | 3702033 - 3703466 | 49886.6 |
| acyl-coa dehydrogenase family protein | VEIS_RS16130 | Q13PC1 | Positive | 3703664 - 3704818 | 41017.5 |
| tripartite tricarboxylate transporter substrate binding protein | VEIS_RS16135 | Not Available | Positive | 3704862 - 3705821 | 33103.1 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
