Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Verminephrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Verminephrobacter |
| Species | Verminephrobacter eiseniae |
| Strain | EF01-2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Symbiotic |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
968620 bp
Thymine Count
964206 bp
Guanine Count
1814980 bp
Cytosine Count
1818943 bp
Genome Length
5566749 bp
Protein-coding Genes
5230 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1177 domain-containing protein | VEIS_RS16040 | Not Available | Positive | 3682578 - 3683534 | 33612.7 |
| hypothetical protein | VEIS_RS26585 | Not Available | Negative | 3684082 - 3684294 | 7633.47 |
| hamp domain-containing protein | VEIS_RS16050 | Not Available | Positive | 3684611 - 3685978 | 49443.1 |
| response regulator transcription factor | VEIS_RS16055 | O32197 | Positive | 3685975 - 3686643 | 24191.4 |
| gamma-aminobutyraldehyde dehydrogenase | VEIS_RS16060 | A8GHZ8 | Negative | 3686682 - 3688115 | 51423.0 |
| abc transporter permease | VEIS_RS16065 | P0AFR9 | Negative | 3688133 - 3688954 | 29700.1 |
| abc transporter permease | VEIS_RS16070 | P77156 | Negative | 3688944 - 3689915 | 35294.8 |
| abc transporter atp-binding protein | VEIS_RS16075 | P77795 | Negative | 3689893 - 3690945 | 38084.5 |
| abc transporter substrate-binding protein | VEIS_RS16080 | P76108 | Negative | 3690955 - 3692133 | 43420.9 |
| lysr family transcriptional regulator | VEIS_RS16085 | Not Available | Positive | 3692830 - 3693765 | 34432.6 |
Pathways
1431 pathways
Health Effects
No health effects information available for this bacterium.
